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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="3.0" xml:lang="en">
   <front>
      <journal-meta>
         <journal-id journal-id-type="publisher-id">SJAR</journal-id>
         <journal-title-group>
            <journal-title>Spanish Journal of Agricultural Research</journal-title>
            <abbrev-journal-title>SJAR</abbrev-journal-title>
         </journal-title-group>
         <issn pub-type="epub">2171-9292</issn>
         <publisher>
            <publisher-name>Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)</publisher-name>
         </publisher>
      </journal-meta>
      <article-meta>
         <article-id pub-id-type="publisher-id">13561</article-id>
         <article-id pub-id-type="doi">10.5424/sjar/2019171-13561</article-id>
         <article-categories>
            <subj-group subj-group-type="heading">
               <subject>Research article</subject>
            </subj-group>
         </article-categories>
         <title-group>
            <article-title>Identification, pathogenicity and distribution of the causal agents of
dieback in avocado orchards in Spain</article-title>
         </title-group>
         <contrib-group>
            <contrib contrib-type="author" corresp="no">
               <name>
                  <surname>Arjona-Girona</surname>
                  <given-names>Isabel</given-names>
                  <aff>
                     <i>CSIC, Instituto de Agricultura Sostenible, Dept. Protección de Cultivos, C/Alameda del Obispo s/n, 14004, Córdoba, Spain.</i>
                  </aff>
               </name>
            </contrib>
            <contrib contrib-type="author" corresp="no">
               <name>
                  <surname>Ruano-Rosa</surname>
                  <given-names>David</given-names>
                  <aff>
                     <i>Instituto Tecnológico
Agrario de Castilla y León, Unidad de Cultivos Leñosos y Hortícolas, Ctra. De Burgos km 119; Finca Zamadueñas, 47071, Valladolid, Spain.</i>
                  </aff>
               </name>
            </contrib>
            <contrib contrib-type="author" corresp="yes">
               <name>
                  <surname>López-Herrera</surname>
                  <given-names>Carlos J.</given-names>
                  <aff>
                     <i>CSIC, Instituto de Agricultura Sostenible, Dept. Protección de Cultivos, C/Alameda del Obispo s/n, 14004, Córdoba, Spain</i>
                  </aff>
               </name>
            </contrib>
         </contrib-group>
         <author-notes>
            <corresp>
               should be addressed to Carlos J. López-Herrera:
               <email xlink:href="lherrera@ias.csic.es">lherrera@ias.csic.es</email>
            </corresp>
         </author-notes>
         <pub-date pub-type="epub">
            <day>01</day>
            <month>03</month>
            <year>2019</year>
         </pub-date>
         <pub-date pub-type="collection">
            <year>2019</year>
         </pub-date>
         <volume>17</volume>
         <issue>1</issue>
         <elocation-id content-type="doi">10.5424/sjar/2019171-13561</elocation-id>
         <history>
            <date date-type="recibido">
               <day>04</day>
               <month>06</month>
               <year>2018</year>
            </date>
            <date date-type="aceptado">
               <day>07</day>
               <month>03</month>
               <year>2019</year>
            </date>
         </history>
         <permissions>
            <copyright-statement>© 2019 INIA</copyright-statement>
            <copyright-year>2019</copyright-year>
            <license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by-nc/3.0/">
               <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution 4.0
International (CC-by 4.0) License.</license-p>
            </license>
         </permissions>
         <abstract id="abstract01">
            <title>Abstract</title>
            <p>
               An increased incidence of dieback from branches in several avocado orchards in southern Spain was observed in 2014. Surveys
were conducted from May to October 2014, sampling the affected branches to isolate the causal agents. A total of 68 fungal isolates,
recovered from ten avocado orchards, were identified, by morphological characterisation and DNA sequencing, as belonging to the
genera:
               <italic>Neofusicoccum parvum</italic>
               (50%),
               <italic>Colletotrichum gloeosporioides</italic>
               (17.6%),
               <italic>Neofusicoccum luteum</italic>
               (16.2%),
               <italic>Neofusicoccum
australe</italic>
               (13.2%),
               <italic>Neofusicoccum mediterraneum</italic>
               (1.5%) and
               <italic>Lasiodiplodia theobromae</italic>
               (1.5%). A decreasing level of virulence in
artificial inoculations on avocado plants was observed in
               <italic>N. parvum, N. luteum, N. mediterraneum, N. australe, C. gloeosporioides</italic>
               and
               <italic>L. theobromae</italic>
               , there were significant differences among
               <italic>N. parvum</italic>
               and the rest of species of this genus, and significant differences
were only observed between
               <italic>N. luteum</italic>
               and
               <italic>C. gloeosporioides</italic>
               . The geographical distribution of
               <italic>N. parvum</italic>
               and
               <italic>N. Luteum</italic>
               covers
different areas, while
               <italic>C. gloeosporioides</italic>
               and
               <italic>N. australe</italic>
               are located only in the areas around Benamocarra and Vélez-Málaga (southern
Spain), while
               <italic>N. mediterraneum</italic>
               and
               <italic>L. theobromae</italic>
               appear only occasionally. This is the first study of avocado branch cankers in Spain
which identifies the causal agents and establishes their pathogenicity groups, with
               <italic>N. parvum</italic>
               as the most important causal agent of
avocado dieback in this area.
            </p>
         </abstract>
         <kwd-group>
            <title>Additional key words:</title>
            <kwd>
               <italic>Botryosphaeriaceae;</italic>
            </kwd>
            <kwd>
               <italic>Lasiodiplodia;</italic>
            </kwd>
            <kwd>
               <italic>Neofusicoccum;</italic>
            </kwd>
            <kwd>
               <italic>Colletotrichum;</italic>
            </kwd>
            <kwd>
               <italic>Persea americana.</italic>
            </kwd>
         </kwd-group>
         <kwd-group>
            <title>Additional key words:</title>
            <kwd>AUDPC (Area Under Disease Progress Curve);</kwd>
            <kwd>ITS (Internal Transcribed Spacer);</kwd>
            <kwd>LSD (Least Significant Difference);</kwd>
            <kwd>PDA (Potato Dextrose Agar).</kwd>
         </kwd-group>
         <funding-group>
            <funding-statement>CICE- Junta de Andalucía, Grupo PAIDI, Spain (AGR-235); ERDF funds (EU).</funding-statement>
         </funding-group>
      </article-meta>
      <notes>
         <p>
            <bold>Author's contributions:</bold>
            Conceived and designed the study (CJLH); performed the experiments (IAG); interpretation of data, wrote
the paper (CJLH, IAG, DRR).
         </p>
         <p>
            <bold>Citation</bold>
            Arjona-Girona, I.; Ruano-Rosa, D.; López-Herrera, C. J. (2019). Identification, pathogenicity and distribution of the
causal agents of dieback in avocado orchards in Spain. Spanish Journal of Agricultural Research, Volume 17, Issue 1, e1003.
            <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5424/sjar/2019171-13561">https://doi.org/10.5424/sjar/2019171-13561</ext-link>
         </p>
         <p>
            <bold>Competing interests:</bold>
            The authors have declared that no competing interests exist.
         </p>
      </notes>
   </front>
   <body>
      <sec id="S1">
         <title>Introduction</title>
         <p>
            The avocado (
            <italic>Persea americana</italic>
            Mill.) is cultivated worldwide, but was commercially produced in Europe for the first time in Spain. In the 1970s, commercial avocado orchards were established in southern Spain (provinces of Málaga and Granada) because the microclimate in this area bears similarities to the conditions in different regions of America, such as Mexico, Peru and California, which have a long tradition of growing this crop, with high levels of production (
            <ext-link>http://faostat3.fao.org/browse/Q/QC/E</ext-link>
            ).
         </p>
         <p>
            However, avocado production is decreasing all over the world due to branch cankers and fruit stem-end rot. Symptomatic trees exhibit red-brown cankers and dieback on branches associated with a characteristic white exudate (
            <xref ref-type="bibr" rid="b16">McDonald &amp; Eskalen, 2011</xref>
            ). The first stages of infection are often caused by mechanical injuries, which allow the access of pathogens. Avocado dieback has been observed in different countries with tropical and subtropical climate, such as Chile (
            <xref ref-type="bibr" rid="b6">
               Auger
               <italic>et al</italic>
               ., 2013
            </xref>
            ) and Colombia (
            <xref ref-type="bibr" rid="b8">
               Burbano-Figueroa
               <italic>et al</italic>
               ., 2018
            </xref>
            ) in South America or Spain (
            <xref ref-type="bibr" rid="b30">
               Zea-Bonilla
               <italic>et al</italic>
               ., 2007
            </xref>
            ) in Europe, and many fungal agents have been identified, especially those belonging to the
            <italic>Botryosphaeriaceae</italic>
            family.
         </p>
         <p>
            In Spain, other subtropical crops different to avo‑­cado, such as loquat (
            <italic>Eribotrya japonica</italic>
            Lindl.), are affected by species of
            <italic>Botryosphaeriaceae</italic>
            , among them,
            <italic>Diplodia malorum</italic>
            Fuckel,
            <italic>Diplodia olivarum</italic>
            A.J.L. Phillips, Frisullo &amp; Lazzizera,
            <italic>Diplodia seriata</italic>
            De Not., species of complex
            <italic>Diplodia pseudoseriata/Diplo­dia alatafructa, Diplodia</italic>
            sp.,
            <italic>Dothiorella sar­mentorum</italic>
            (Fr.) A.J.L. Phillips, Alves &amp; Luque,
            <italic>Neo­fusicoccum mediterraneum</italic>
            Crous, Wingf &amp; A.J.L. Phillips,
            <italic>Neo­fusicoccum parvum</italic>
            (Pennycook &amp; Samuels) Crous, Slippers &amp; A.J.L. Philips,
            <italic>Spencermartinsia plurivora</italic>
            Abdollahz., Javadi &amp; A.J.L. Phillips and
            <italic>Spencermartinsia viticola</italic>
            (A.J.L. Phillips &amp; J. Luque) A.J.L. Phillips, A. Alves &amp; Crous (
            <xref ref-type="bibr" rid="b14">
               González-Domínguez
               <italic>et al</italic>
               ., 2017
            </xref>
            ). In this crop, other pathogens, namely
            <italic>Alter­naria alternata</italic>
            (Fr.) Keissl.,
            <italic>Penicillium expansum</italic>
            Link,
            <italic>Botrytis cinerea</italic>
            Pers.,
            <italic>Colletotrichum gloeosporioides</italic>
            (Penz.) Penz. &amp; Sacc.,
            <italic>Pestalotiopsis clavispora</italic>
            (G.F. Atk.) Steyaert and
            <italic>D. seriata</italic>
            caused post-harvest diseases (
            <xref ref-type="bibr" rid="b22">
               Palou
               <italic>et al</italic>
               ., 2016
            </xref>
            ). Other Mediterranean crops such as almond (
            <italic>Prunus dulcis</italic>
            Webb) are also affected by fungi
            <italic>Botryosphaeriaceae</italic>
            (
            <xref ref-type="bibr" rid="b15">
               Gramaje
               <italic>et al</italic>
               ., 2012
            </xref>
            ) and
            <italic>N. mediterraneum</italic>
            and
            <italic>Botryosphaeria dothidea</italic>
            (Moug. ex Fr.) Ces. &amp; De Not. have been isolated from olive (
            <italic>Olea europaea</italic>
            L.) branches (
            <xref ref-type="bibr" rid="b21">
               Moral
               <italic>et al</italic>
               ., 2017
            </xref>
            ) and
            <italic>N. parvum</italic>
            from mango (
            <italic>Mangifera indica</italic>
            L.) trees (
            <xref ref-type="bibr" rid="b3">Arjona-Girona &amp; López-Herrera, 2016</xref>
            ).
         </p>
         <p>
            <italic>Colletotrichum gloeosporioides</italic>
            and
            <italic>N. parvum</italic>
            have been described as causal agents of anthracnose and stem end rot in avocado fruit (cv. Hass) in Turkey (
            <xref ref-type="bibr" rid="b1">Akg&#252;l &amp; Awan, 2016</xref>
            ).
            <italic>N. parvum</italic>
            and
            <italic>D. seriata</italic>
            caused dieback in grapevine (
            <italic>Vitis vinifera</italic>
            L.) (
            <xref ref-type="bibr" rid="b26">
               Spagnolo
               <italic>et al</italic>
               ., 2017
            </xref>
            ). Over the last two decades, significant losses have been recorded in citrus production in Portugal from anthracnose symp­toms caused by
            <italic>C. gloeosporioides</italic>
            (
            <xref ref-type="bibr" rid="b24">
               Ramos
               <italic>et al</italic>
               ., 2016
            </xref>
            ).
         </p>
         <p>
            <italic>Neofusicoccum parvum</italic>
            , 
            <italic>Neofusicoccum luteum</italic>
            (Penny­cook &amp; Samuels) Crous, Slippers &amp; A.J.L. Phillips and
            <italic>Neofusicoccum australe</italic>
            (Slippers, Crous &amp; M.J. Wingf.) Crous, Slippers &amp; A.J.L. Phillips were identified in California (
            <xref ref-type="bibr" rid="b17">
               McDonald
               <italic>et al</italic>
               ., 2009
            </xref>
            ).
            <italic>N. parvum</italic>
            was also found in Mexico (
            <xref ref-type="bibr" rid="b18">
               Molina-Gayosso
               <italic>et al</italic>
               ., 2012
            </xref>
            ), mainly affecting fruits, and
            <italic>Lasiodiplodia theobromae</italic>
            (Pat.) Griffon &amp; Maubl. in Peru (
            <xref ref-type="bibr" rid="b2">
               Alama
               <italic>et al</italic>
               ., 2006
            </xref>
            ). Although the most important post-harvest disease in Chile is anthracnose, caused by
            <italic>C. gloeosporioides</italic>
            , a new disease caused by
            <italic>N. australe</italic>
            was also found (
            <xref ref-type="bibr" rid="b19">
               Montealegre
               <italic>et al</italic>
               ., 2016
            </xref>
            ).
         </p>
         <p>The aims of this work were to study the distribution of avocado trees affected by branch cankers in commercial orchards in southern Spain, identify their fungal agents and establish their virulence groups.</p>
      </sec>
      <sec id="S2">
         <title>Material and methods</title>
         <sec id="S2.1">
            <title>Sampling and fungal isolation</title>
            <p>Field surveys were carried out on avocado orchards from May to October 2014 in Málaga (southern Spain). Young twigs and branches of avocado trees from commercial orchards showing dieback symptoms were isolated (<xref ref-type="fig" rid="F1">Fig. 1A-D</xref>).</p>
            <fig id="F1">
    <label>Figure 1.</label>
    <caption>
    <title>Disease symptoms on avocado tree branches
associated with dieback. A, Dry branches. B, External
necrosis in twigs. C, Internal lesions in branches. D,
External lesions with exudates.</title>
    </caption>
    <graphic xlink:href="sjar_e1003_f01.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</fig>

            <p>
               The collected plant material was disinfested in 10 g L
               <sup>-1</sup>
               sodium hypochlorite for 3 min and pieces of bark or internal wood showing lesions were plated onto potato dextrose agar (PDA) medium (Difco Laboratoires, Detroit, MI, USA) with lactic acid (0.2%). The cultures were kept on acidified PDA at 25°C in darkness for 3 days, and later, pure cultures were obtained by excising and transferring hyphal tips from the fungal colonies to fresh PDA plates.
            </p>
         </sec>
         <sec id="S2.2">
            <title>Fungal identification</title>
            <p />
            <p>
               The pure cultures obtained were first identified based on colony morphology and conidial characteristics by comparing them with the previous studies by
               <xref ref-type="bibr" rid="b23">Phillips (2006)</xref>
               .
            </p>
            <p>
               To confirm the previous macroscopic fungal identifi­cation, DNA extractions from each isolate recovered with a similar colony morphology to
               <italic>Botryosphaeriaceae</italic>
               isolates were performed as described by
               <xref ref-type="bibr" rid="b11">
                  Choi
                  <italic>et al</italic>
                  . (1992)
               </xref>
               , and a sequence analysis of the internal transcribed spacer (ITS) nrDNA region using the primers ITS4 and ITS5, an analysis of partial &#946;-tubulin gene BT2a and BT2b (
               <xref ref-type="bibr" rid="b13">Glass &amp; Donaldsons, 1995</xref>
               ) and a translation elongation factor 1-α gene regions (EF1-α) EF1-728F and EF1-986R (
               <xref ref-type="bibr" rid="b9">Carbone &amp; Kohn, 1999</xref>
               ) were performed. PCR products (600 bp for ITS, 340-495 bp for BT2 and 350 bp for EF-1α) were sequenced in the two ways (3'-5'and 5'-3') by the Proteomic Department of SCAI (University of Córdoba, Spain). The sequences of each isolate were used to search for similar sequences in GenBank using BLAST (v. 2.0, National Center for Biotechnology Information, US Nat Inst of Health, Bethesda, MD, USA).
            </p>
            <p>PDA Petri dishes with pure cultures were incubated at 25 &#176;C in darkness and pycnidia formation was induced on water agar with pine needles and UV light; the length and width of the conidia were then measured.</p>
         </sec>
         <sec id="S2.3">
            <title>Pathogenicity tests</title>
            <p />
            <p>Pathogenicity tests were carried out on stems of eighteen-month-old avocado plants of cv. Topa-Topa, growing on Laura substrate consisting of peat, coconut fiber and perlite at a ratio of 6:1:0.6 v/v/v. One plant per fungal isolate was used and five wounds were made on each stem. Five-mm mycelia plugs from the edge of a fresh fungal colony were placed onto the wounded stem and incubated in a greenhouse at 25 &#176;C &#177; 5 &#176;C. The necrotic lesions were measured after 3, 6 and 9 days of inoculation and the standardised area under disease progress curves (AUDPCs) was calculated. To fulfil Koch's postulates, pieces of necrotic tissue were taken from infected twigs and plated on PDA Petri dishes to identify the pathogen.</p>
         </sec>
         <sec id="S2.4">
            <title>Statistical analysis</title>
            <p />
            <p>
               A completely randomised experimental design with 'Statistic 9' was used to study the virulence of the isolates. The treatment averages were compared using Fisher's Least Significant Difference (LSD) test to separate the means (
               <italic>p</italic>
               &lt;0.05) (
               <xref ref-type="bibr" rid="b27">Steel &amp; Torrie, 1985</xref>
               ).
            </p>
         </sec>
      </sec>
      <sec id="S3">
         <title>Results</title>
         <sec id="S3.1">
            <title>Fungal identification</title>
            <p>Amplified sequences from each of the 14 representative isolates were compared with isolates from GenBank (accession numbers: see <xref ref-type="table" rid="T1">Table 1</xref>). Ba­sed on a BLAST search of Gen-Bank nucleotide database, the closest hits of the isolates with the ITS, BT2 and EF1-α sequences are shown in <xref ref-type="table" rid="T1">Table 1</xref>. The identity percentages between nucleotides were very high - close to 100% in most cases. The number of insertions and deletions in one sequence relative to another were low because there were not many gaps (0-1%), and therefore it was not necessary to introduce a space into an alignment to compensate for the other.</p>
            <table-wrap id="T1">
    <label>Table 1.</label>
    <caption>
    <title> Closest hits of the representative fungal isolates, with the ITS, BT2 and EF1-α sequences. </title>
    </caption>
    <graphic xlink:href="sjar_e1003_t01.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</table-wrap>

            <p>
               After the macroscopic fungal identification of the morphological characters of 68 isolates and their subsequent confirmation by DNA sequence analyses, all the isolates were identified as belonging to the genera
               <italic>Neofusicoccum, Colletotrichum</italic>
               and
               <italic>Lasiodiplodia</italic>
               , with six different species in different proportions:
               <italic>N. parvum</italic>
               (50%),
               <italic>C. gloeosporioides</italic>
               (18%),
               <italic>N. australe</italic>
               (13%),
               <italic>N. luteum</italic>
               (16%),
               <italic>N. mediterraneum</italic>
               (1.5%) and
               <italic>L. theobromae</italic>
               (1.5%) (<xref ref-type="table" rid="T2">Table 2</xref>).
            </p>
            <table-wrap id="T2">
    <label>Table 2.</label>
    <caption>
    <title>  Identification of fungal isolates.</title>
    </caption>
    <graphic xlink:href="sjar_e1003_t02.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</table-wrap>

            <p>
               The width and length of the conidia (<xref ref-type="fig" rid="F2">Fig. 2A-F</xref>) from 14 representative fungal isolates:
               <italic>N. parvum</italic>
               (AR1, AR7, AR10, AR17 CA, AR22 and AR33),
               <italic>C. gloeosporioides</italic>
               (AR14 CA and AR28 P),
               <italic>N. australe</italic>
               (AR31 and AR41-2),
               <italic>N. luteum</italic>
               (AR18 and AR46),
               <italic>N. mediterraneum</italic>
               (AR30) and
               <italic>L. theobromae</italic>
               (AR12 G) were then measured (<xref ref-type="table" rid="T3">Table 3</xref>).
               <italic>L. theobromae</italic>
               (21.99&#177;1.43 &#956;m &#215; 13.18&#177;0.5 &#956;m) showed the greatest conidia size, although the shape of the conidia was not the most elongated.
               <italic>N. parvum</italic>
               (17.97&#177;1.73 &#956;m &#215; 6.5&#177;0.49 &#956;m) and
               <italic>N. mediterraneum</italic>
               (22.66&#177;1.57 &#956;m &#215; 7.03&#177;0.18 &#956;m) were of medium size but had a more elongated shape and the rest,
               <italic>C. gloeosporioides</italic>
               (18.14&#177;1.29 &#956;m &#215; 5.23&#177;0.49 &#956;m),
               <italic>N. luteum</italic>
               (16.62&#177;3.25 &#956;m &#215; 4.30&#177;0.54 &#956;m) and
               <italic>N. australe</italic>
               (16.89&#177;1.3 &#956;m &#215; 4.09&#177;0.39 &#956;m) were the smallest, but had the greatest elongation.
            </p>
            <fig id="F2">
    <label>Figure 2.</label>
    <caption>
    <title>Conidia from representative isolates. A, <italic>Neofusicoccum parvum.</italic> B, <italic>Colletotrichum gloeosporioides.</italic> C, <italic>Neofusicoccum austral.</italic> D, <italic>Neofusicoccum
luteum.</italic> E, <italic>Neofusicoccum mediterraneum.</italic> F, <italic>Lasiodiplodia theobromae</italic>. Scale bar= 20 &#956;m.</title>
    </caption>
    <graphic xlink:href="sjar_e1003_f02.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</fig>

            <table-wrap id="T3">
    <label>Table 3.</label>
    <caption>
    <title> Average measurements (width and length in &#956;m
of 120 conidia) from the different fungal isolates. </title>
    </caption>
    <graphic xlink:href="sjar_e1003_t03.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</table-wrap>

            <p>
               <italic>Neofusicoccum parvum</italic>
               is the main pathogen causing branch dieback in avocado plants and it was present in all the locations sampled, with a total incidence of 50%.
               <italic>N. luteum</italic>
               was also common, while
               <italic>C. gloeosporioides</italic>
               and
               <italic>N. australe</italic>
               were located only at the biggest locations (Benamocarra and Vélez Málaga) with rates of incidence of 16.2%, 17.6% and 13.2%, respectively.
               <italic>N. mediterraneum</italic>
               and
               <italic>L. theobromae</italic>
               appeared occasionally, with low rates of incidence of around 1.5% (<xref ref-type="table" rid="T4">Table 4</xref>).
            </p>
            <table-wrap id="T4">
    <label>Table 4.</label>
    <caption>
    <title> Number and percentage (in brackets) of isolates of each species by location.  </title>
    </caption>
    <graphic xlink:href="sjar_e1003_t04.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</table-wrap>

         </sec>
         <sec id="S3.2">
            <title>Pathogenicity test</title>
            <p />
            <p>
               The avocado plants artificially inoculated with fun­gal isolates showed necrotic stem lesions (<xref ref-type="fig" rid="F3">Fig. 3</xref>) and the pathogenicity of all the genera of the fungal isolates was evaluated and compared (F=24.54; df=2, 342;
               <italic>p</italic>
               &lt;0.05).
               <italic>Neofusicoccum</italic>
               was the most virulent genus, with significant differences with
               <italic>Colletotrichum</italic>
               and
               <italic>Lasiodiplodia</italic>
               , although no differences were observed between these last two genera. We also evaluated the pathogenicity of the different species of the
               <italic>Neofusicoccum</italic>
               genus (F=20.03; df=3, 276;
               <italic>p</italic>
               &lt;0.05), with
               <italic>N. parvum</italic>
               being the most virulent, significantly different from
               <italic>N. australe</italic>
               ,
               <italic>N. mediterraneum</italic>
               and
               <italic>N. luteum</italic>
               , with no differences observed among the latter. Finally, the pathogenicity of species from the different genera was also evaluated (F=26.33; df=5, 339; P&lt;0.05) with the following results (in the decreasing order of pathogenicity):
               <italic>N. parvum</italic>
               ,
               <italic>N. luteum</italic>
               ,
               <italic>N. mediterraneum</italic>
               ,
               <italic>N. australe</italic>
               ,
               <italic>C. gloeosporioides</italic>
               and
               <italic>L. theobromae</italic>
               ; there were also significant differences between
               <italic>N. parvum</italic>
               and the other species, and the differences between
               <italic>N. luteum</italic>
               and
               <italic>C. gloeosporioides</italic>
               were also observed.
            </p>
            <fig id="F3">
    <label>Figure 3.</label>
    <caption>
    <title>Artificial inoculations. A, Avocado plant with
points of inoculations (red arrowheads). B, Mycelia plugs
(5-mm in diameter) placed onto wounded stem and sealed
with parafilm. C, Necrotic lesions on avocado stem.</title>
    </caption>
    <graphic xlink:href="sjar_e1003_f03.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</fig>

            <p>
               Significantly different virulence groups were esta­blished within each species (from 68 isolates) with more than one representative isolate, and 10 groups for
               <italic>N. parvum</italic>
               , 6 for
               <italic>N. luteum</italic>
               , 3 for
               <italic>N. australe</italic>
               and 5 for
               <italic>C. gloeosporioides</italic>
               were obtained (<xref ref-type="table" rid="T5">Table 5</xref>). The viru­lence was homogenized for
               <italic>N. australe</italic>
               because it was defined in only three groups, although with a similar number of isolates for
               <italic>N. luteum</italic>
               and
               <italic>C. gloeosporioides</italic>
               , the virulence was defined in more groups (5 or 6).
            </p>
            <table-wrap id="T5">
    <label>Table 5.</label>
    <caption>
    <title>Virulence groups for <italic>Neofusicoccum parvum, Neofusicoccum
australe, Neofusicoccum luteum</italic> and <italic>Colletotrichum gloeosporioides</italic>
isolates. Comparison of data averaged of five repetitions using Fisher's LSD
test to separate the means (<italic>p</italic>&lt;0.05) (Steel &amp; Torrie 1985). In each column,
numbers followed by the same letter are not significantly different according
to the LSD test. </title>
    </caption>
    <graphic xlink:href="sjar_e1003_t05.jpg" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</table-wrap>

         </sec>
      </sec>
      <sec id="S4">
         <title>Discussion</title>
         <p>
            This study shows the incidence and diversity of fungal isolates associated with avocado dieback in commercial orchards in southern Spain. The list in­cludes different genera (
            <italic>Neofusicoccum, Colletotri­chum</italic>
            and
            <italic>Lasiodiplodia</italic>
            ) and species (
            <italic>N. parvum, N. luteum, N. mediterraneum, N. australe, C. gloeos­porioides</italic>
            and
            <italic>L. theobromae</italic>
            ) that are also usually involved in dieback in avocado orchards in other countries (
            <xref ref-type="bibr" rid="b16">McDonald &amp; Eskalen, 2011</xref>
            ).
         </p>
         <p>
            <italic>Neofusicoccum parvum</italic>
            is the most abundant spe­cies, with an incidence of 50%, followed by 
            <italic>C. gloeosporioides</italic>
            with 18%,
            <italic>N. australe</italic>
            and
            <italic>N. luteum</italic>
            with 13% and 16%, respectively, and finally, 
            <italic>N. mediterraneum</italic>
             and 
            <italic>L.</italic>
            <italic>theobromae</italic>
            , which appear only occasionally with an incidence of 1.5% in each case. Our results agree with the greater incidence of the species
            <italic>N. parvum</italic>
            and
            <italic>N. australe</italic>
            associated with almond orchards in other areas of Spain (
            <xref ref-type="bibr" rid="b15">
               Gramaje
               <italic>et al</italic>
               ., 2012
            </xref>
            ).
            <italic>N. parvum</italic>
            is consi­de­red the most common species associated with grapevine decline syndrome (
            <xref ref-type="bibr" rid="b4">
               Armengol
               <italic>et al</italic>
               ., 2001
            </xref>
            ;
            <xref ref-type="bibr" rid="b5">
               Aroca
               <italic>et al</italic>
               ., 2006
            </xref>
            ) and
            <italic>N. mediterraneum</italic>
             was also isolated from olive fruits in southern Spain, showing symptoms of Dalmatian disease (
            <xref ref-type="bibr" rid="b20">
               Moral
               <italic>et al</italic>
               ., 2010
            </xref>
            ).
         </p>
         <p>
            In other countries,
            <italic>N. parvum</italic>
            ,
            <italic>N. luteum</italic>
            and
            <italic>N. australe</italic>
            associated with avocado dieback have also been described in California (
            <xref ref-type="bibr" rid="b17">
               McDonald
               <italic>et al</italic>
               ., 2009
            </xref>
            ). Typical Dothiorella canker symptoms observed inclu­ded darkened and friable bark showing a dry, white, powdery exudate. These studies concluded that the higher incidence of these pathogens is a consequence of the high-density planting frequent in Californian avocado crops and they recommend more suitable management strategies (
            <xref ref-type="bibr" rid="b16">McDonald &amp; Eskalen, 2011</xref>
            ).
            <italic>N. luteum</italic>
            was identified in California as the main cause of stem-end rot in harvested avocado fruit (65%), followed by
            <italic>C. gloeosporioides</italic>
            with an incidence of 35% (
            <xref ref-type="bibr" rid="b29">
               Twizeyimana
               <italic>et al</italic>
               ., 2013
            </xref>
            ). In the same way, the fungi detected in avocado branch cankers in Spain could also affect the fruit directly, leading to a fall in production.
            <italic>L. theobromae</italic>
            has been also described as the causal agent of avocado dieback in Peru (
            <xref ref-type="bibr" rid="b2">
               Alama
               <italic>et al</italic>
               ., 2006
            </xref>
            ). The symptoms of cankers and red-brown lesion with white exudates observed after artificial inoculation were similar to natural infection. There are other examples in which species of these genera have been associated to avocado causing anthracnose and stem-end rot in Turkey (
            <xref ref-type="bibr" rid="b1">Akg&#252;l &amp; Awan, 2016</xref>
            ), or to other plants such as oak (
            <italic>Quercus robur</italic>
            L.) in Portugal (
            <xref ref-type="bibr" rid="b7">
               Barradas
               <italic>et al</italic>
               ., 2013
            </xref>
            ) and olive in Tunisia (
            <xref ref-type="bibr" rid="b28">
               Triki
               <italic>et al</italic>
               ., 2015
            </xref>
            ) causing dieback, or shoot blight and plant decay on pomegranate (
            <italic>Punica granatum</italic>
            L.) in Italy (
            <xref ref-type="bibr" rid="b25">
               Riccioni
               <italic>et al</italic>
               ., 2017
            </xref>
            ).
         </p>
         <p>
            In our study, we conclude that
            <italic>N. parvum</italic>
            and
            <italic>N. luteum</italic>
            are widely extended, while
            <italic>C. gloeosporioides</italic>
            and
            <italic>N. australe</italic>
            are located only in the biggest areas, which could be due to the wider dispersion or higher production of conidia of
            <italic>N. parvum</italic>
            and
            <italic>N. luteum</italic>
            . Future experiments should be carried out using spore trapping (
            <xref ref-type="bibr" rid="b12">
               Eskalen
               <italic>et al</italic>
               ., 2013
            </xref>
            ) to confirm this theory. Our results, showing the greater virulence of isolates of
            <italic>N. parvum</italic>
            and
            <italic>N. luteum</italic>
            when compared with
            <italic>C. gloeosporioides</italic>
            and the greater virulence of
            <italic>N. parvum</italic>
            vs
            <italic>N. australe</italic>
            , coincide with the results of
            <xref ref-type="bibr" rid="b12">
               Eskalen
               <italic>et al</italic>
               . (2013)
            </xref>
            , who reported that lesions caused by
            <italic>N. parvum</italic>
            and
            <italic>N. luteum</italic>
            were larger than those caused by
            <italic>N. australe</italic>
            .
            <italic>N. mediterraneum</italic>
            and
            <italic>L. theobromae</italic>
            appeared occasionally, but did not appear to be a great threat.
         </p>
         <p>
            Although
            <italic>N. parvum</italic>
            has been previously described in avocado (
            <xref ref-type="bibr" rid="b30">
               Zea-Bonilla
               <italic>et al</italic>
               ., 2007
            </xref>
            ) and in other crops such as blueberry (
            <italic>Vaccinium</italic>
            spp.) (
            <xref ref-type="bibr" rid="b10">
               Castillo
               <italic>et al</italic>
               ., 2013
            </xref>
            ) and mango (
            <xref ref-type="bibr" rid="b3">Arjona-Girona &amp; López-Herrera, 2016</xref>
            ) on the southern coast of Andalusia, Spain, an increased incidence of dieback on branches in avocado orchards has been observed and this could constitute a serious threat, in a similar way to
            <italic>N. luteum, N. australe</italic>
            and
            <italic>C. gloeosporioides</italic>
            , to the yield of avocado orchards in this area. The fungal inoculum tends to increase due to the poor management of pruning remains, which are often shredded and mixed into the soil instead of being burned, as famers usually do in this area.
         </p>
         <p>
            This is the first study of avocado cankers on branches in southern Spain which evaluates the causal agents and establishes its pathogenicity groups.
            <italic>N. parvum</italic>
            is the most abundant species observed, and is the most important causal agent of dieback avocado in this area.
            <italic>N. luteum, N. australe</italic>
            and
            <italic>C. gloeosporioides</italic>
            showed the lower incidence as causal agents of the disease.
         </p>
      </sec>
      <sec id="S5">
         <title>Acknowledgments</title>
         <p>The authors thank the staff of TROPS of Vélez-Malaga (Spain) for their technical assistance in avocado orchard surveys for this study.</p>
      </sec>
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